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Search results for: Capsule

Your compute capsule's DOI

Every published capsule has a DOI… Are DOIs assigned at the capsule level or the level of individual files?… If I update my capsule, will it get a new DOI?
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Written by Shahar Zaks
Updated over a week ago

Publishing on Code Ocean: an overview

The capsule submission and publication process… When you are ready for your compute capsule to be publicly available, you will: commit changes… From here, your capsule will be verified for computational reproducibility
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Written by Shahar Zaks
Updated over a week ago

Duplicating a compute capsule

To duplicate a compute capsule, select Duplicate from the Capsule menu… Duplicating a compute capsule allows you to create a copy of it while keeping the original unchanged… A copy of the capsule will open and be automatically added to your dashboard
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Written by Shahar Zaks
Updated over a week ago

Discarding a Git commit

To restore your capsule to its previous state… After making changes, you'll see a Git commit window in the capsule's Timeline: You can click the
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Written by Shahar Zaks
Updated over a week ago

Your published capsule: an overview

Your capsule's DOI, URL, and public availability… Your capsule: has a DOI and both general and BibTex citations -- all available in your capsule's… prefix https://codeocean.com, a unique identifier, and a version signifier, e.g., https://codeocean.com/capsule
Shahar Zaks avatar
Written by Shahar Zaks
Updated over a week ago

What is a compute capsule?

A compute capsule is the key to enabling guaranteed computational reproducibility on Code Ocean… To upload code to Code Ocean, a compute capsule needs to be created to store not only the code, but everything… At the core of the compute capsule is a Docker image and Dockerfile, which contains the necessary infrastructural
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Written by Shahar Zaks
Updated over a week ago

Git clone your capsule to your computer

Click the Capsule menu and select Clone via Git: This will provide you with the appropriate Git repository… From that point, you can push, pull, etc. to the corresponding Code Ocean capsule
Shahar Zaks avatar
Written by Shahar Zaks
Updated over a week ago

Sharing a published compute capsule

Sharing a published compute capsule is easy… You can embed a capsule widget into a webpage: Click Share Click Embed Copy the HTML
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Written by Shahar Zaks
Updated over a week ago

Template capsule: Minimal papaja example

Capsule: https://codeocean.com/capsule/8183533/tree/v1 Two sentence overview: This capsule demonstrates… Intended use case: You can duplicate this capsule, add any further R packages you need, and replace the
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Written by Shahar Zaks
Updated over a week ago

Saving dependencies installed during (Cloud Workstation) runtime

How to record your dependencies and transfer it to your capsule… files in /code and /data while in a Cloud Workstation session will be automatically synced back to the capsule… Cloud Workstation session and re-add them to your environment once you're back in the non-interactive capsule
Shahar Zaks avatar
Written by Shahar Zaks
Updated over a week ago