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Template capsule: Building from environment.yml, with deep learning Jupyter notebooks in a loop
Template capsule: Building from environment.yml, with deep learning Jupyter notebooks in a loop
Updated over a week ago
  • Two sentence overview: This capsule demonstrates how to modify the Dockerfile to build an environment from a manifest file, like requirements.txt  or environment.yml, rather than using the available package managers. It also provides syntax for running Jupyter notebooks in a loop, and in parallel.

  • Intended use case: You can duplicate this capsule, add your own manifest file and notebooks, and begin working. The readme provides instructions for switching to a GPU environment.

  • Audience: This is for advanced users who have some experience sharing and reconstructing computational environments with tools like Conda and pip. 

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