If your project contains a Jupyter notebook, there are two ways to run it. The first is to use the jupyter nbconvert command in a shell script, rendering it to HTML. The second is to run Jupyter interactively by launching a Jupyter Cloud Workstation environment in a separate tab.

To use Jupyter on Code Ocean:

If your capsule has a pip  or conda installer available, click the Cloud Workstation dropdown and select Jupyter:

This will automatically launch the typical Jupyter notebook interface.

Note: If you don't have pip or conda installers available, click the 'Environment' icon to access your environment configuration screen add python3-pip and python3-setuptools  via apt-get, and then add jupyter  via the pip3 installer that pops up.

General notes:

  1. Leaving a Cloud Workstation running will continuously use quota; click 'Shut Down Cloud Workstation' to close the session.
  2. Changes to files in the /code  and /data folders in a Cloud Workstation session will be synced back to your capsule. Any changes to /results  or the environment will not be. Please record changes you made to either, and re-implement them in a non-cloud-workstation session, if you wish to save them.

 

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